Blueprint Medicines Reports Third Quarter 2018 Financial Results

CAMBRIDGE, Mass., Oct. 30, 2018 /PRNewswire/ -- Blueprint Medicines Corporation (NASDAQ: BPMC), a leader in discovering and developing targeted kinase medicines for patients with genomically defined diseases, today reported financial results and provided a business update for the third quarter ended September 30, 2018.

"Our third quarter and recent accomplishments represent tremendous progress across our portfolio, marked by the receipt of positive regulatory feedback from the FDA for avapritinib and BLU-667 and the presentation of new data across our clinical- and research-stage pipeline," said Jeff Albers, Chief Executive Officer of Blueprint Medicines. "As we prepare to enter a critical year, we are now accelerating our efforts with a focus on executing five registration-enabling studies across seven patient populations, building a global commercial enterprise to deliver medicines to patients and investing in the next generation of precision therapies."

Clinical Programs:

Avapritinib: Systemic Mastocytosis (SM)

    --  Blueprint Medicines announced that the U.S. Food and Drug Administration
        (FDA) granted Breakthrough Therapy Designation to avapritinib for the
        treatment of patients with advanced SM, including the subtypes of
        aggressive SM, SM with an associated hematologic neoplasm and mast cell
        leukemia.
    --  Blueprint Medicines announced that it has screened the first patient in
        PATHFINDER, its registration-enabling, open-label, single-arm Phase 2
        clinical trial in patients with advanced SM. Blueprint Medicines expects
        to initiate PIONEER, its registration-enabling, randomized,
        placebo-controlled Phase 2 clinical trial in patients with indolent and
        smoldering SM, by the end of 2018.
    --  Blueprint Medicines announced that the European Medicines Agency has
        granted orphan drug designation to avapritinib for the treatment of
        mastocytosis.
    --  Enrollment in the expansion portion of the Phase 1 EXPLORER clinical
        trial for advanced SM is ongoing. Blueprint Medicines plans to present
        data from this trial at the 60(th) American Society for Hematology (ASH)
        Annual Meeting and Exposition in December 2018.

Avapritinib: Gastrointestinal Stromal Tumors (GIST)

    --  Blueprint Medicines continues to evaluate avapritinib in its Phase 1
        NAVIGATOR clinical trial and will present updated data across multiple
        patient populations, including PDGFRA-driven GIST, third-line or later
        GIST, and second-line GIST, at the 2018 Connective Tissue Oncology
        Society (CTOS) Annual Meeting on November 15, 2018. Based on data from
        this trial, Blueprint Medicines plans to submit a new drug application
        (NDA) to the FDA for avapritinib for the treatment of patients with
        PDGFR  Exon 18 mutant GIST and fourth-line GIST in the first half of
        2019.

BLU-667: RET-Altered Solid Tumors

    --  Blueprint Medicines recently received written feedback from the FDA
        supporting expedited development of BLU-667 and plans to submit an NDA
        for BLU-667 in the first half of 2020 based on additional data from the
        ongoing Phase 1 ARROW trial. Based on the feedback from the FDA,
        Blueprint Medicines currently expects the NDA submission will be for
        separate potential indications: (1) patients with RET-fusion positive
        NSCLC and papillary thyroid cancer (PTC) who have progressed following
        prior systemic therapy and (2) patients with RET-mutant medullary
        thyroid cancer (MTC) who have progressed following treatment with a
        tyrosine kinase inhibitor.
    --  In October 2018, Blueprint Medicines presented updated data from its
        ongoing Phase 1 ARROW clinical trial of BLU-667 in patients with MTC and
        PTC at the 88(th) Annual Meeting of the American Thyroid Association.
        The data showed that BLU-667 is highly active and well-tolerated in
        these patient populations, with increased activity observed at higher
        dose levels and longer treatment durations. Ninety percent of evaluable
        patients with MTC and PTC experienced radiographic tumor reductions,
        regardless of RET alteration or prior multi-kinase inhibitor therapy.
        The response rate was 62 percent in patients with MTC in the 300 and 400
        milligram once daily dose groups who were treated for at least 24 weeks.
        The data also showed that BLU-667 was well-tolerated, and most adverse
        events reported by investigators were Grade 1. Read the full data here.
    --  In September 2018, Blueprint Medicines presented two clinical case
        studies demonstrating proof-of-concept for BLU-667 in combination with
        Tagrisso® (osimertinib) in patients with treatment-resistant,
        EGFR-mutant NSCLC harboring an acquired RET fusion. The data showed that
        the combination of BLU-667 and osimertinib overcame resistance to
        standard therapy, and both patients achieved a partial response with a
        78 percent reduction in target tumors per RECIST version 1.1. In these
        two patients, the combination was well-tolerated, and all reported
        adverse events were Grade 1 or 2. Read the full data here.

BLU-554: Hepatocellular Carcinoma (HCC)

    --  In September 2018, Blueprint Medicines and its partner, CStone
        Pharmaceuticals, submitted an investigational new drug (IND) application
        for BLU-554 to Chinese health authorities. Subject to approval of the
        IND application, the companies plan to expand Blueprint Medicines'
        ongoing Phase 1 clinical trial of BLU-554 as a monotherapy for the
        treatment of advanced HCC to include clinical sites in Mainland China. 
        Additionally, the companies plan to initiate a proof-of-concept clinical
        trial evaluating BLU-554 in combination with CS1001, a clinical-stage
        anti-PD-L1 immunotherapy, in 2019.

Research Programs:

BLU-782: Fibrodysplasia Ossificans Progressiva (FOP)

    --  In September 2018, Blueprint Medicines presented preclinical
        proof-of-concept data for BLU-782, an investigational precision therapy
        specifically designed to target the underlying cause of FOP, at the 2018
        American Society for Bone and Mineral Research Annual Meeting.  The data
        showed that BLU-782 prevented injury- and surgery-induced heterotrophic
        ossification, reduced edema and restored healthy tissue response to
        muscle injury in a well-characterized FOP mouse model. Read the full
        data here.
    --  Blueprint Medicines expects to submit an IND application to the FDA for
        BLU-782 by the end of 2018, and subject to review of the IND
        application, plans to initiate a Phase 1 clinical trial in healthy
        volunteers in the first quarter of 2019. Upon completion of the Phase 1
        clinical trial, Blueprint Medicines plans to advance BLU-782 into a
        registration-enabling Phase 2 clinical trial in patients with FOP.

Corporate:

    --  In October 2018, Blueprint Medicines announced the expansion of its
        leadership team with the appointment of Christina Rossi as Chief
        Commercial Officer. Blueprint Medicines also announced the appointment
        of Paul Beresford as General Manager, International.

Third Quarter Financial Results:

    --  Cash Position: As of September 30, 2018, cash, cash equivalents and
        investments were $559.6 million, as compared to $673.4 million as of
        December 31, 2017. This decrease was primarily related to cash used in
        operating activities, partially offset by the $40.0 million upfront
        payment received in connection with entering into the collaboration with
        CStone Pharmaceuticals and the $10.0 million milestone payment achieved
        under the Roche collaboration in June 2018.
    --  Collaboration Revenues: Collaboration revenues were $1.1 million for the
        third quarter of 2018, as compared to $8.1 million for the third quarter
        of 2017. This decrease was primarily due to the termination of the
        Alexion agreement in 2017.
    --  R&D Expenses: Research and development expenses were $64.6 million for
        the third quarter of 2018, as compared to $39.3 million for the third
        quarter of 2017. This increase was primarily attributable to increased
        clinical and manufacturing expenses associated with advancing
        avapritinib and BLU-667 further through clinical trials and increased
        personnel-related expenses. Research and development expenses included
        $4.8 million in stock-based compensation expenses for the third quarter
        of 2018.
    --  G&A Expenses: General and administrative expenses were $12.0 million for
        the third quarter of 2018, as compared to $7.4 million for the third
        quarter of 2017. This increase was primarily due to increased
        personnel-related expenses and increased professional fees, including
        pre-commercial planning activities. General and administrative expenses
        included $3.6 million in stock-based compensation expenses for the third
        quarter of 2018.
    --  Net Loss: Net loss was $72.7 million for the third quarter of 2018, or a
        net loss per share of $1.66, as compared to a net loss of $37.7 million
        for the third quarter of 2017, or a net loss per share of $0.96.

Financial Guidance:

Based on its current plans, Blueprint Medicines expects that its existing cash, cash equivalents and investments, excluding any potential option fees and milestone payments under its existing collaborations with Roche and CStone Pharmaceuticals, will be sufficient to enable it to fund its operating expenses and capital expenditure requirements into the second half of 2020.

Earnings Conference Call Information:

Blueprint Medicines will host a live conference call and webcast at 8:30 a.m. ET today to discuss third quarter 2018 financial results and recent business activities. The conference call may be accessed by dialing (855) 626-8618 (domestic) or (531) 289-2784 (international) and referring to conference ID 7598866. A webcast of the conference call will be available in the Investors section of the Blueprint Medicines' website at http://ir.blueprintmedicines.com. The archived webcast will be available on Blueprint Medicines' website approximately two hours after the conference call and will be available for 30 days following the call.

CTOS Conference Call Information:

Blueprint Medicines will host a live conference call and webcast to discuss data being presented at the 2018 CTOS Annual Meeting on November 15(th) at 7:30 a.m. ET. The conference call may be accessed by dialing (855) 728-4793 (domestic) or (503) 343-6666 (international) and referring to conference ID 3479587. A webcast of the conference call will be available in the Investors section of the Blueprint Medicines' website at http://ir.blueprintmedicines.com. The archived webcast will be available on Blueprint Medicines' website approximately two hours after the conference call and will be available for 30 days following the call.

About Blueprint Medicines:

Blueprint Medicines is developing a new generation of targeted and potent kinase medicines to improve the lives of patients with genomically defined diseases. Its approach is rooted in a deep understanding of the genetic blueprint of cancer and other disease driven by the abnormal activation of kinases. Blueprint Medicines is advancing four programs in clinical development for subsets of patients with gastrointestinal stromal tumors, hepatocellular carcinoma, systemic mastocytosis, non-small cell lung cancer, medullary thyroid cancer and other advanced solid tumors, as well as multiple programs in research and preclinical development. For more information, please visit www.blueprintmedicines.com.

Cautionary Note Regarding Forward-Looking Statements:

This press release contains forward-looking statements within the meaning of the Private Securities Litigation Reform Act of 1995, as amended, including, without limitation, statements regarding plans and timelines for the clinical development of avapritinib, BLU-554, BLU-667 and BLU-782; the potential benefits of Blueprint Medicines' current and future drug candidates in treating patients; plans and timelines for initiating Blueprint Medicines' PIONEER trial; the potential benefits of receiving Breakthrough Therapy Designation for avapritinib for the treatment of patients with advanced SM, including the subtypes of aggressive SM, SM with an associated hematologic neoplasm and mast cell leukemia; plans to present data from the Phase 1 EXPLORER clinical trial; plans and timelines for submitting an NDA to the FDA for avapritinib; plans and timelines for submitting an NDA to the FDA for BLU-667; plans and timelines for expanding Blueprint Medicines' ongoing Phase 1 clinical trial of BLU-554 monotherapy to include clinical sites in Mainland China; plans and timelines for initiating a proof-of-concept clinical trial evaluating BLU-554 in combination with CS1001; plans and timelines for submitting an IND application to the FDA for BLU-782; plans and timelines for initiating a Phase 1 clinical trial for BLU-782 in healthy volunteers; plans to work with clinical experts and the patient community to design a potential Phase 2 clinical trial of BLU-782 in patients with FOP; expectations regarding Blueprint Medicines' existing cash, cash equivalents and investments; and Blueprint Medicines' strategy, business plans and focus. The words "may," "will," "could," "would," "should," "expect," "plan," "anticipate," "intend," "believe," "estimate," "predict," "project," "potential," "continue," "target" and similar expressions are intended to identify forward-looking statements, although not all forward-looking statements contain these identifying words. Any forward-looking statements in this press release are based on management's current expectations and beliefs and are subject to a number of risks, uncertainties and important factors that may cause actual events or results to differ materially from those expressed or implied by any forward-looking statements contained in this press release, including, without limitation, risks and uncertainties related to the delay of any current or planned clinical trials or the development of Blueprint Medicines' drug candidates, including avapritinib, BLU-554, BLU-667 and BLU-782; Blueprint Medicines' advancement of multiple early-stage efforts; Blueprint Medicines' ability to successfully demonstrate the safety and efficacy of its drug candidates; the preclinical and clinical results for Blueprint Medicines' drug candidates, which may not support further development of such drug candidates; actions of regulatory agencies, which may affect the initiation, timing and progress of clinical trials; Blueprint Medicines' ability to develop and commercialize companion diagnostic tests for its current and future drug candidates, including companion diagnostic tests for BLU-554 for FGFR4-driven HCC, avapritinib for PDGFR D842V-driven GIST and BLU-667 for RET-driven NSCLC; and the success of Blueprint Medicines' cancer immunotherapy collaboration with F. Hoffmann-La Roche Ltd. and Hoffmann-La Roche Inc. and Blueprint Medicines' collaboration with CStone Pharmaceuticals. These and other risks and uncertainties are described in greater detail in the section entitled "Risk Factors" in Blueprint Medicines' Quarterly Report on Form 10-Q for the quarter ended June 30, 2018, as filed with the Securities and Exchange Commission (SEC) on August 1, 2018, and any other filings that Blueprint Medicines has made or may make with the SEC in the future. Any forward-looking statements contained in this press release represent Blueprint Medicines' views only as of the date hereof and should not be relied upon as representing its views as of any subsequent date. Except as required by law, Blueprint Medicines explicitly disclaims any obligation to update any forward-looking statements.

Trademarks:

Tagrisso® is a registered trademark of AstraZeneca plc. All other trademarks and trade names in this press release are the property of Blueprint Medicines Corporation.


                                                                                         
            
              Blueprint Medicines Corporation

                                                                                
            
              Selected Condensed Consolidated Balance Sheet Data

                                                                                                  
            
              (in thousands)

                                                                                             
            
              
                (unaudited)






                                                                                                                    September 30                              December 31,



                                                                                                                            2018                                       2017




     Cash, cash equivalents and investments                                                                                                $
            559,636               $
     673,356



     Working capital (1)                                                                                                                             509,378                  642,615



     Total assets                                                                                                                                    606,110                  715,737



     Deferred revenue                                                                                                                                 47,200                   35,373



     Term loan payable                                                                                                                                   277                    1,518



     Lease incentive obligation                                                                                                                       15,046                   16,331



     Total stockholders' equity                                                                                                                      489,296                  623,970



     
              (1)    Blueprint Medicines defines working capital as current assets less current liabilities.


                                                                 
          
               Blueprint Medicines Corporation

                                                             
        
           Condensed Consolidated Statements of Operations Data

                                                               
          
              (in thousands, except per share data)

                                                                    
         
                
                  (unaudited)




                                                                                                             Three Months Ended                     Nine Months Ended

                                                                                                               September 30,                         September 30,



                                                                                           2018                                2017              2018                 2017




           Collaboration revenue                                                                    $
              1,095                  $
         8,068                           $
          43,488      $
          19,798



           Operating expenses:



           Research and development                                                                            64,562                        39,300                                  173,089             101,058



           General and administrative                                                                          12,041                         7,378                                   34,285              19,894




           Total operating expenses                                                                            76,603                        46,678                                  207,374             120,952



           Other income (expense):



           Other income, net                                                                                    2,799                           954                                    7,635               2,240



           Interest expense                                                                                      (14)                         (47)                                    (69)              (178)




           Total other income                                                                                   2,785                           907                                    7,566               2,062




           Net loss                                                                              $
              (72,723)              $
         (37,703)                       $
          (156,320)   $
          (99,092)




           Net loss per share - basic and diluted                                                  $
              (1.66)                $
         (0.96)                          $
          (3.57)     $
          (2.67)




           Weighted-average number of common shares used in                                                    43,915                        39,130                                   43,825              37,053
      net loss per share - basic and diluted

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SOURCE Blueprint Medicines Corporation