Illumina Reports Financial Results for Second Quarter of Fiscal Year 2025

--  Revenue of $1.06 billion for Q2 2025, down 3% from Q2 2024 on both a reported and constant currency basis
--  GAAP operating margin of 20.2% and non-GAAP operating margin of 23.8% for Q2 2025
--  GAAP diluted EPS of $1.49 and non-GAAP diluted EPS of $1.19 for Q2 2025
--  Cash provided by operations of $234 million and free cash flow of $204 million for Q2 2025
--  For fiscal year 2025, we now expect:
--  Total company constant currency revenue decline in the range of (2.5%) to (0.5%), up from (3%) to (1%) previously
--  Non-GAAP operating margin of approximately 22% - 22.5%, up from 21.5% - 22.0% previously
--  Non-GAAP diluted EPS in the range of $4.45 - $4.55, an increase from our May guidance of $4.20 - $4.30. This includes a benefit of approximately 10 cents from recently passed legislation that allows U.S. based R&D spend to be tax-deductible
--  In the quarter, repurchased approximately 4.5 million shares of Illumina stock for $380 million at an average price of $84.66 per share
--  Entered into a definitive agreement to acquire SomaLogic from Standard BioTools; transaction expected to close in the first half of 2026, subject to regulatory approval

SAN DIEGO, July 31, 2025 /PRNewswire/ -- Illumina, Inc. (Nasdaq: ILMN) ("Illumina" or the "company") today announced its financial results for the second quarter of fiscal year 2025.

"The Illumina team again delivered results that exceeded our guidance, driven by the continued ramp in X consumables, as well as accelerating growth in clinical, our largest customer segment," said Jacob Thaysen, Chief Executive Officer. "In research, we are actively helping our customers navigate a constrained funding environment. Even in these challenging conditions, the team's focus on operational excellence helped drive margin expansion, enabling us to increase our expectations for the year."

Second quarter Core Illumina segment results

                                                                   GAAP                   Non-GAAP (a)



 
          Dollars in millions, except per share amounts Q2 2025      Q2 2024  Q2 2025               Q2 2024



 Revenue (b)                                               $1,059        $1,092    $1,059                 $1,092



 Gross margin (c)                                          65.6 %       68.0 %   69.4 %                69.4 %



 Research and development (R&D) expense                      $247          $241      $243                   $241



 Selling, general and administrative (SG&A) expense          $234           $60      $241                   $275



 Operating profit                                            $214          $442      $252                   $242



 Operating margin                                          20.2 %       40.5 %   23.8 %                22.2 %



 Tax provision                                                $71           $35       $54                    $55



 Tax rate                                                  23.4 %       35.0 %   22.2 %                24.2 %



 Net income                                                  $235           $66      $187                   $174



 Diluted EPS                                                $1.49         $0.41     $1.19                  $1.09



 (a) 
 See tables in "Results of Operations - Non-GAAP" section below for GAAP and non-GAAP reconciliations.


 (b) 
 Revenue for Q2 2024 included intercompany revenue of $9 million prior to the spin-off of GRAIL.


 (c)   Non-GAAP gross margin remained flat primarily due to higher freight and duties costs related to tariffs and an increase in field service costs, partially offset by lower
        strategic partnership revenue, that is lower margin, and a more favorable product mix. The decrease in GAAP gross margin was primarily due to a $23 million impairment of an
        acquired intangible asset.

Capital expenditures for free cash flow purposes were $30 million for Q2 2025. Cash flow provided by operations was $234 million, compared to $243 million in the prior year period. Free cash flow (cash flow provided by operations less capital expenditures) was $204 million for the quarter, compared to $213 million in the prior year period. Depreciation and amortization expense was $68 million for Q2 2025. At the close of the quarter, the company held $1.16 billion in cash, cash equivalents and short-term investments.

Share repurchases for Q2 2025 were $380 million and the company intends to repurchase incremental shares over the course of the year as part of our approximate $800 million authorization remaining at the end of the quarter.

Key announcements since our last earnings release

--  Launched TruSight Oncology 500 version 2 (TSO 500 v2), an updated version of Illumina's comprehensive genomic profiling assay for cancer research
--  TIME named Illumina to its World's Most Sustainable Companies list for the second year in a row, and U.S. News & World Report named Illumina to its Best Companies to Work For list
--  Entered into a definitive agreement with Standard BioTools under which Illumina will acquire SomaLogic and other specified assets
--  Unveiled PromoterAI, a new AI algorithm that accurately deciphers pathogenic regulatory genetic variants in the noncoding regions of the human genome
--  Received approval from Japan's Ministry of Health, Labour and Welfare (MHLW) for TruSight(TM) Oncology (TSO) Comprehensive for Class III/IV Medical Device (Specially Controlled Medical Device)
--  Launch of DRAGEN(TM) v4.4 software, the industry's most comprehensive secondary analysis solution powering clinical oncology research and multiomic applications

A full list of recent announcements can be found in the company's News Center.

Financial outlook and guidance
The company provides forward-looking guidance on a non-GAAP basis, including on a constant currency basis for revenue and revenue growth rates. The company is unable to provide a reconciliation of forward-looking non-GAAP financial measures to the most directly comparable GAAP reported financial measures because it is unable to predict with reasonable certainty the impact of items such as acquisition-related expenses, fair value adjustments to contingent consideration, gains and losses from strategic investments, potential future asset impairments, restructuring activities, the ultimate outcome of pending litigation, and currency exchange rate fluctuations without unreasonable effort. These items are uncertain, inherently difficult to predict, depend on various factors, and could have a material impact on GAAP reported results for the guidance period. For the same reasons, the company is unable to address the significance of the unavailable information, which could be material to future results.

Conference call information
The conference call will begin at 1:30 pm Pacific Time (4:30 pm Eastern Time) on Thursday, July 31, 2025. Interested parties may access the live webcast via the Investor Info section of Illumina's website or directly through the following link - https://illumina-earnings-call-q2-2025.open-exchange.net/. To ensure timely connection, please join at least ten minutes before the scheduled start of the call. A replay of the conference call will be posted on Illumina's website after the event and will be available for at least 30 days following.

Statement regarding use of non-GAAP financial measures
The company reports non-GAAP results for diluted earnings per share, net income, gross margin, operating expenses, including research and development expense, selling general and administrative expense, legal contingency and settlement, and goodwill and intangible impairment, operating income, operating margin, gross profit, other income (expense), tax provision, constant currency revenue and growth, and free cash flow (on a consolidated and, as applicable, segment basis) in addition to, and not as a substitute for, or superior to, financial measures calculated in accordance with GAAP. The company's financial measures under GAAP include substantial charges such as amortization of acquired intangible assets among others that are listed in the reconciliations of GAAP and non-GAAP financial measures included in this press release, as well as the effects of currency translation. Management has excluded the effects of these items in non-GAAP measures to assist investors in analyzing and assessing past and future operating performance. Non-GAAP net income, diluted earnings per share and operating margin are key components of the financial metrics utilized by the company's board of directors to measure, in part, management's performance and determine significant elements of management's compensation.

The company encourages investors to carefully consider its results under GAAP, as well as its supplemental non-GAAP information and the reconciliation between these presentations, to more fully understand its business. Reconciliations between GAAP and non-GAAP results are presented in the tables of this release.

Use of forward-looking statements
This release may contain forward-looking statements that involve risks and uncertainties. Among the important factors to which our business is subject that could cause actual results to differ materially from those in any forward-looking statements are: (i) changes in the rate of growth in the markets we serve, including the proteomics market; (ii) the volume, timing and mix of customer orders among our products and services; (iii) our ability to adjust our operating expenses to align with our revenue expectations; (iv) the completion of the proposed acquisition of SomaLogic, Inc. and certain other assets (the SomaLogic Business) from Standard BioTools Inc. on the anticipated terms and timeline, or at all, including the ability of the parties to obtain required regulatory approvals - such as under the Hart-Scott-Rodino Act in the United States or from government authorities that may have or assert jurisdiction outside the United States - and to satisfy other conditions to closing; (v) our ability to successfully integrate the SomaLogic Business into our existing operations and the SomaLogic Business' technology and products into our portfolio; (vi) our ability to successfully manage partner and customer relationships in the proteomics market; (vii) uncertainty regarding the impact of our recent inclusion on the "unreliable entities list" by regulatory authorities in China and the decision by regulatory authorities in China to not permit us to export sequencing instruments into China; (viii) tariffs recently imposed or threatened by the U.S. government and its trading partners, and other possible tariffs or trade protection measures and our efforts to mitigate the impact of such tariffs; (ix) our ability to manufacture robust instrumentation and consumables, including the SomaLogic Business' products; (x) the success of products and services competitive with our own; (xi) challenges inherent in developing, manufacturing, and launching new products and services, including expanding or modifying manufacturing operations and reliance on third-party suppliers for critical components; (xii) the impact of recently launched or pre-announced products and services on existing products and services; (xiii) our ability to modify our business strategies to accomplish our desired operational goals; (xiv) our ability to realize the anticipated benefits from prior or future actions to streamline and improve our R&D processes, reduce our operating expenses and maximize our revenue growth; (xv) our ability to further develop and commercialize our instruments, consumables, and products; (xvi) to deploy new products, services, and applications, and to expand the markets for our technology platforms; (xvii) the risk of additional litigation arising against us in connection with the GRAIL acquisition; (xviii) our ability to obtain approval by third-party payors to reimburse patients for our products; (xix) our ability to obtain regulatory clearance for our products from government agencies; (xx) our ability to successfully partner with other companies and organizations to develop new products, expand markets, and grow our business; (xxi) uncertainty, or adverse economic and business conditions, including as a result of slowing or uncertain economic growth or armed conflict; (xxii) the application of generally accepted accounting principles, which are highly complex and involve many subjective assumptions, estimates, and judgments and (xxiii) legislative, regulatory and economic developments, together with other factors detailed in our filings with the Securities and Exchange Commission, including our most recent filings on Forms 10-K and 10-Q, or in information disclosed in public conference calls, the date and time of which are released beforehand. We undertake no obligation, and do not intend, to update these forward-looking statements, to review or confirm analysts' expectations, or to provide interim reports or updates on the progress of the current quarter.

About Illumina
Illumina is improving human health by unlocking the power of the genome. Our focus on innovation has established us as a global leader in DNA sequencing and array-based technologies, serving customers in the research, clinical, and applied markets. Our products are used for applications in the life sciences, oncology, reproductive health, agriculture, and other emerging segments. To learn more, visit www.illumina.com and connect with us on X, Facebook, LinkedIn, Instagram, TikTok, and YouTube.

                                        
          
            Illumina, Inc.

                            
          
            Condensed Consolidated Balance Sheets

                                        
          
            (In millions)




                                                                                            June 29,  December 29,
                                                                                                 2025          2024



 
            ASSETS                                                                     (unaudited)



 Current assets:



 Cash and cash equivalents                                                                      $934        $1,127



 Short-term investments                                                                          221            93



 Accounts receivable, net                                                                        701           735



 Inventory, net                                                                                  575           547



 Prepaid expenses and other current assets                                                       210           244



 Total current assets                                                                          2,641         2,746



 Property and equipment, net                                                                     764           815



 Operating lease right-of-use assets                                                             397           419



 Goodwill                                                                                      1,113         1,113



 Intangible assets, net                                                                          238           295



 Deferred tax assets, net                                                                        534           567



 Other assets                                                                                    400           348



 Total assets                                                                                 $6,087        $6,303





 
            LIABILITIES AND STOCKHOLDERS' EQUITY



 Current liabilities:



 Accounts payable                                                                               $200          $221



 Accrued liabilities                                                                             762           827



 Term debt, current portion                                                                      499           499



 Total current liabilities                                                                     1,461         1,547



 Operating lease liabilities                                                                     528           554



 Term debt                                                                                     1,492         1,490



 Other long-term liabilities                                                                     348           339



 Stockholders' equity                                                                          2,258         2,373



 Total liabilities and stockholders' equity                                                   $6,087        $6,303

                                                              
      
            Illumina, Inc.

                                                      
   
      Condensed Consolidated Statements of Operations

                                                        
   
        (In millions, except per share amounts)

                                                               
      
            (unaudited)




                                                                                                                 Three Months Ended                     Six Months Ended


                                                                                                        June 29,                    June 30,  June 29,                   June 30,
                                                                                                            2025                         2024       2025                        2024



 Revenue:



 Product revenue                                                                                           $912                         $927     $1,793                      $1,803



 Service and other revenue                                                                                  147                          185        307                         385



 Total revenue                                                                                            1,059                        1,112      2,100                       2,188



 Cost of revenue:



 Cost of product revenue (a)                                                                                276                          250        529                         504



 Cost of service and other revenue (a)                                                                       71                           95        160                         202



 Amortization of acquired intangible assets                                                                  17                           46         33                          94



 Total cost of revenue                                                                                      364                          391        722                         800



 Gross profit                                                                                               695                          721      1,378                       1,388



 Operating expense:



 Research and development (a)                                                                               247                          325        499                         660



 Selling, general and administrative (a)                                                                    234                          147        501                         588



 Goodwill and intangible impairment                                                                           -                       1,886                                 1,889



 Total operating expense                                                                                    481                        2,358      1,000                       3,137



 Income (loss) from operations                                                                              214                      (1,637)       378                     (1,749)



 Other income (expense), net                                                                                 92                        (339)       110                       (337)



 Income (loss) before income taxes                                                                          306                      (1,976)       488                     (2,086)



 Provision for income taxes                                                                                  71                           12        122                          28



 Net income (loss)                                                                                         $235                     $(1,988)      $366                    $(2,114)



 Earnings (loss) per share:



 Basic                                                                                                    $1.49                     $(12.48)     $2.32                    $(13.28)



 Diluted                                                                                                  $1.49                     $(12.48)     $2.31                    $(13.28)



 Shares used in computing earnings (loss) per share:



 Basic                                                                                                      157                          159        158                         159



 Diluted                                                                                                    157                          159        158                         159




 The consolidated results for Q2 2024 and YTD 2024 include the results for GRAIL which was spun off on June 24, 2024.





 (a) Includes stock-based compensation expense for stock-based awards:



                                                         Three Months Ended                     Six Months Ended


                                                June 29,                    June 30,  June 29,                   June 30,
                                                    2025                         2024       2025                        2024



 Cost of product revenue                             $6                           $7        $11                         $13



 Cost of service and other revenue                    1                            1          1                           4



 Research and development                            28                           43         58                          82



 Selling, general and administrative                 34                           59         72                         109



 Stock-based compensation expense before taxes      $69                         $110       $142                        $208

                                                                                   
  
            Illumina, Inc.

                                                                              
     
    Condensed Statements of Cash Flows

                                                                                   
  
            (In millions)

                                                                                    
  
            (unaudited)





 
            TABLE 1: CONSOLIDATED STATEMENTS OF CASH FLOWS AND FREE CASH FLOWS:




                                                                                                                                     Three Months Ended           Six Months Ended


                                                                                                                            June 29,                    June 30,      June 29,     June 30,
                                                                                                                                2025                         2024           2025          2024



 Net cash provided by operating activities                                                                                     $234                          $80           $474          $157



 Net cash used in investing activities                                                                                         (49)                        (41)         (112)         (89)



 Net cash used in financing activities                                                                                        (371)                       (225)         (566)        (191)



 Effect of exchange rate changes on cash and cash equivalents                                                                     7                          (2)            11           (5)



 Net decrease in cash and cash equivalents                                                                                    (179)                       (188)         (193)        (128)



 Cash and cash equivalents, beginning of period                                                                               1,113                        1,108          1,127         1,048



 Cash and cash equivalents, end of period                                                                                      $934                         $920           $934          $920





 Calculation of free cash flow:



 Net cash provided by operating activities                                                                                     $234                          $80           $474          $157



 Purchases of property and equipment                                                                                           (30)                        (32)          (62)         (67)



 Free cash flow (a)                                                                                                            $204                          $48           $412           $90



 
 The consolidated results for Q2 2024 and YTD 2024 include the results for GRAIL which was spun off on June 24, 2024.

TABLE 2: CORE ILLUMINA FREE CASH FLOWS:

                                                     Three Months Ended                     Six Months Ended


                                            June 29,                    June 30,  June 29,                   June 30,
                                                2025                         2024       2025                        2024



 Net cash provided by operating activities     $234                         $243       $474                        $527



 Purchases of property and equipment           (30)                        (30)      (62)                       (63)



 Free cash flow (a)                            $204                         $213       $412                        $464



 (a) Free cash flow, which is a non-GAAP financial measure, is calculated as net cash provided by operating activities reduced by purchases of property and equipment. Free cash
      flow is useful to management as it is one of the metrics used to evaluate our performance and to compare us with other companies in our industry. However, our calculation of
      free cash flow may not be comparable to similar measures used by other companies.

                                                                              
       
            Illumina, Inc.

                                                                   
     
        Results of Operations - Constant Currency Revenue

                                                                            
      
            (Dollars in millions)

                                                                                
       
            (unaudited)





 
            TABLE 1: CORE ILLUMINA - CONSTANT CURRENCY REVENUE:




                                                                                                Three Months Ended                                        Six Months Ended


                                                                     June 29,                            June 30,                   % Change   June 29,                   June 30,    % Change
                                                                         2025                                 2024                                   2025                        2024



 
            Revenue                                                 $1,059                               $1,092                       (3) %     $2,100                      $2,148        (2) %



 Less: Hedge effect                                                      (2)                                   4                                      5                           7



 Revenue, excluding hedge effect                                       1,061                                1,088                                  2,095                       2,141



 Less: Exchange rate effect                                                7                                                                        (9)



 Constant currency revenue (a)                                        $1,054                               $1,088                       (3) %     $2,104                      $2,141        (2) %


 
            TABLE 2: CONSOLIDATED - CONSTANT CURRENCY REVENUE:




                                                                           Three Months Ended                       Six Months Ended


                                                                  June 29,         June 30,   % Change   June 29,                  June 30,    % Change
                                                                      2025              2024                   2025                       2024



 
            Revenue                                              $1,059            $1,112       (5) %     $2,100                     $2,188        (4) %



 Less: Hedge effect                                                   (2)                4                      5                          7



 Revenue, excluding hedge effect                                    1,061             1,108                  2,095                      2,181



 Less: Exchange rate effect                                             7                                     (9)



 Constant currency revenue (a)                                     $1,054            $1,108       (5) %     $2,104                     $2,181        (4) %



                                                                                                                                        
          The consolidated results for Q2 2024 and YTD 2024 include the results for GRAIL which was spun off on June 24, 2024.





 (a) Constant currency revenue growth, which is a non-GAAP financial measure, is calculated using comparative prior period foreign exchange rates to translate current period revenue, net of the effects of hedges.

                                                                                                    
          
            Illumina, Inc.

                                                                                           
          
            Results of Operations - Non-GAAP

                                                                                        
          
            (In millions, except per share amounts)

                                                                                                      
          
            (unaudited)





 
            TABLE 1: RECONCILIATION OF GAAP AND NON-GAAP DILUTED EARNINGS (LOSS) PER SHARE:




                                                                                                                                      Three Months Ended                                                   Six Months Ended


                                                                                                        June 29,                                         June 30,                          June 29,                                 June 30,
                                                                                                            2025                                                        2024                      2025                                            2024


                                                                                                          Core/                                Core               Consolidated                   Core/                     Core              Consolidated
                                                                                          Consolidated                           Illumina                                        Consolidated                Illumina



 
            GAAP diluted earnings (loss) per share                                                      $1.49                               $0.41                    $(12.48)                    $2.31                    $0.85                   $(13.28)



 Cost of revenue (b)                                                                                       0.25                                0.10                        0.29                      0.37                     0.19                       0.60



 R&D expense (b)                                                                                           0.03                                                                                    0.09                     0.01                       0.01



 SG&A expense (b)                                                                                        (0.04)                             (1.35)                     (1.33)                     0.09                   (0.84)                    (0.75)



 Goodwill and intangible impairment (b)                                                                       -                                                         11.84                                              0.02                      11.86



 Other (income) expense, net (b)                                                                         (0.65)                               2.06                        2.06                    (0.85)                    2.01                       2.01



 Provision for income taxes (b)                                                                            0.11                              (0.13)                     (0.02)                     0.15                   (0.17)



 Non-GAAP diluted earnings per share (a)                                                                  $1.19                               $1.09                       $0.36                     $2.16                    $2.07                      $0.45


 
            TABLE 2: RECONCILIATION OF GAAP AND NON-GAAP NET INCOME (LOSS):




                                                                                                           Three Months Ended                                                   Six Months Ended


                                                                                            June 29,                          June 30,                          June 29,                                June 30,
                                                                                                2025                                         2024                      2025                                           2024


                                                                                              Core/                Core                Consolidated                   Core/                    Core              Consolidated
                                                                               Consolidated          Illumina                                         Consolidated               Illumina



 
            GAAP net income (loss)                                                           $235                 $66                     $(1,988)                     $366                    $135                   $(2,114)



 Cost of revenue (b)                                                                             40                  15                           46                        59                      30                         95



 R&D expense (b)                                                                                  4                                                                       15                       2                          2



 SG&A expense (b)                                                                               (7)              (215)                       (211)                       12                   (132)                     (120)



 Goodwill and intangible impairment (b)                                                           -                                          1,886                                                3                      1,889



 Other (income) expense, net (b)                                                              (102)                328                          328                     (135)                    319                        319



 Provision for income taxes (b)                                                                  17                (20)                         (4)                       25                    (28)



 Non-GAAP net income (a)                                                                       $187                $174                          $57                      $342                    $329                        $71


 
            Amounts in tables are rounded to the nearest millions. As a result, certain amounts may not recalculate.





 The consolidated results for Q2 2024 and YTD 2024 include the results for GRAIL which was spun off on June 24, 2024.




  (a)                                                                                                                     Non-GAAP net income and diluted earnings per share exclude the effects of the pro forma adjustments detailed above. Non-GAAP net income and diluted earnings per share are
                                                                                                                           key components of the financial metrics utilized by the company's board of directors to measure, in part, management's performance and determine significant elements of
                                                                                                                           management's compensation. Management has excluded the effects of these items in these measures to assist investors in analyzing and assessing our past and future operating
                                                                                                                           performance.


  (b)                                                                                                                   
 Refer to Reconciliations between GAAP and Non-GAAP Results of Operations for details of amounts.

                                                                                                     
         
            Illumina, Inc.

                                                                                      
          
           Results of Operations - Non-GAAP (continued)

                                                                                                 
         
            (Dollars in millions)

                                                                                                      
         
            (unaudited)





 
            TABLE 3: RECONCILIATION OF GAAP AND NON-GAAP RESULTS OF OPERATIONS AS A PERCENT OF REVENUE:




                                                                                                                                                         
         
          Three Months Ended


                                                                                                                  June 29, 2025                                                    
          
           June 30, 2024


                                                                                                                      Core/
                                                                                                                   Consolidated                                 Core Illumina                             GRAIL                   Elims                      Consolidated



 
            GAAP gross profit (loss) (b)                                                                          $695     65.6 %                      $743     68.0 %                             $(16)                    $(6)             $721       64.8 %



 Acquisition-related costs (c)                                                                                        16      1.5 %                        15      1.4 %                                31                                        46        4.2 %



 Transformational initiatives (d)                                                                                      1      0.1 %



 Intangible impairment (h)                                                                                            23      2.2 %



 Non-GAAP gross profit (a)                                                                                          $735     69.4 %                      $758     69.4 %                               $15                     $(6)             $767       69.0 %





 
            GAAP R&D expense                                                                                      $247     23.3 %                      $241     22.1 %                               $88                     $(4)             $325       29.2 %



 Transformational initiatives (d)                                                                                    (4)   (0.4) %



 Non-GAAP R&D expense                                                                                               $243     22.9 %                      $241     22.1 %                               $88                     $(4)             $325       29.2 %





 
            GAAP SG&A expense                                                                                     $234     22.1 %                       $60      5.5 %                               $88                     $(1)             $147       13.2 %



 Acquisition-related costs (c)                                                                                        12      1.1 %                       218     20.0 %                               (4)                                      214       19.3 %



 Transformational initiatives (d)                                                                                    (5)   (0.5) %                       (3)   (0.3) %                                                                        (3)     (0.3) %



 Non-GAAP SG&A expense                                                                                              $241     22.7 %                      $275     25.2 %                               $84                     $(1)             $358       32.2 %





 
            GAAP goodwill and intangible impairment                                   
          
           $       -                  
          $     -                                      $1,886                
   $   -           $1,886      169.6 %



 Goodwill impairment (h)                                                                                               -                                                                         (1,466)                                  (1,466)   (131.8) %



 Intangible (IPR&D) impairment (h)                                                                                     -                                                                           (420)                                    (420)    (37.8) %



 Non-GAAP goodwill and intangible impairment                                            
          
           $       -                  
          $     -                          
         $      -               
   $   -       
 $      -





 
            GAAP operating profit (loss)                                                                          $214     20.2 %                      $442     40.5 %                          $(2,078)                    $(1)         $(1,637)   (147.2) %



 Cost of revenue                                                                                                      40      3.8 %                        15      1.4 %                                31                                        46        4.2 %



 R&D costs                                                                                                             4      0.4 %



 SG&A costs                                                                                                          (6)   (0.6) %                     (215)  (19.7) %                                 4                                     (211)    (19.0) %



 Goodwill and intangible impairment                                                                                    -                                                                           1,886                                     1,886      169.6 %



 Non-GAAP operating profit (loss) (a)                                                                               $252     23.8 %                      $242     22.2 %                            $(157)                    $(1)              $84        7.6 %





 
            GAAP other income (expense), net                                                                       $92      8.7 %                    $(341)  (31.2) %                                $2                
   $   -           $(339)    (30.5) %



 Strategic investment (gain) loss, net (e)                                                                         (102)   (9.7) %                       334     30.5 %                                                                        334       30.0 %



 Other (f)                                                                                                             -                                 (6)   (0.5) %                                                                        (6)     (0.5) %



 Non-GAAP other (expense) income, net (a)                                                                          $(10)   (1.0) %                     $(13)   (1.2) %                                $2                
   $   -            $(11)     (1.0) %



 
   
            Amounts in tables are rounded to the nearest millions. As a result, certain amounts may not recalculate.


   
          
            Percentages of revenue are calculated based on the revenue of the respective segment.




 
   The consolidated results for Q2 2024 and YTD 2024 include the results for GRAIL which was spun off on June 24, 2024.

                                                                                                     
        
            Illumina, Inc.

                                                                                      
          
          Results of Operations - Non-GAAP (continued)

                                                                                                  
        
            (Dollars in millions)

                                                                                                       
        
            (unaudited)





 
            TABLE 3: RECONCILIATION OF GAAP AND NON-GAAP RESULTS OF OPERATIONS AS A PERCENT OF REVENUE:




                                                                                                                                                         
        
          Six Months Ended


                                                                                                                  June 29, 2025                                                   
          
           June 30, 2024


                                                                                                                      Core/
                                                                                                                   Consolidated                                Core Illumina                             GRAIL                    Elims                      Consolidated



 
            GAAP gross profit (loss) (b)                                                                        $1,378     65.6 %                    $1,436    66.9 %                             $(38)                    $(10)           $1,388      63.5 %



 Acquisition-related costs (c)                                                                                        33      1.6 %                        30     1.4 %                                65                                         95       4.3 %



 Transformational initiatives (d)                                                                                      3      0.1 %



 Intangible impairment (h)                                                                                            23      1.1 %



 Non-GAAP gross profit (a)                                                                                        $1,437     68.4 %                    $1,466    68.3 %                               $27                     $(10)           $1,483      67.8 %





 
            GAAP R&D expense                                                                                      $499     23.8 %                      $479    22.3 %                              $189                      $(8)             $660      30.2 %



 Acquisition-related costs (c)                                                                                       (1)



 Transformational initiatives (d)                                                                                   (14)   (0.7) %                       (2)  (0.1) %                                                                         (2)    (0.1) %



 Non-GAAP R&D expense                                                                                               $484     23.1 %                      $477    22.2 %                              $189                      $(8)             $658      30.1 %





 
            GAAP SG&A expense                                                                                     $501     23.8 %                      $396    18.5 %                              $192                
    $   -             $588      26.9 %



 Acquisition-related costs (c)                                                                                        17      0.8 %                       171     7.9 %                              (13)                                       158       7.2 %



 Transformational initiatives (d)                                                                                   (24)   (1.1) %                      (38)  (1.8) %                               (1)                                      (39)    (1.8) %



 Other (g)                                                                                                           (5)   (0.2) %



 Non-GAAP SG&A expense                                                                                              $489     23.3 %                      $529    24.6 %                              $178                
    $   -             $707      32.3 %





 
            GAAP goodwill and intangible impairment                                   
          
          $        -                                  $3     0.1 %                            $1,886                
    $   -           $1,889      86.3 %



 Goodwill impairment (h)                                                                                               -                                                                        (1,466)                                   (1,466)   (67.0) %



 Intangible (IPR&D) impairment (h)                                                                                     -                                 (3)  (0.1) %                             (420)                                     (423)   (19.3) %



 Non-GAAP goodwill and intangible impairment                                            
          
          $        -                  
          $     -                        
         $       -               
    $   -       
 $      -





 
            GAAP operating profit (loss)                                                                          $378     18.0 %                      $558    26.0 %                          $(2,305)                     $(2)         $(1,749)   (79.9) %



 Cost of revenue                                                                                                      59      2.8 %                        30     1.4 %                                65                                         95       4.3 %



 R&D costs                                                                                                            15      0.7 %                         2     0.1 %                                                                           2       0.1 %



 SG&A costs                                                                                                           12      0.6 %                     (133)  (6.2) %                                13                                      (120)    (5.4) %



 Goodwill and intangible impairment                                                                                    -                                   3     0.1 %                             1,886                                      1,889      86.3 %



 Non-GAAP operating profit (loss) (a)                                                                               $464     22.1 %                      $460    21.4 %                            $(341)                     $(2)             $117       5.4 %





 
            GAAP other income (expense), net                                                                      $110      5.2 %                    $(342) (15.9) %                                $5                
    $   -           $(337)   (15.4) %



 Strategic investment (gain) loss, net (e)                                                                         (135)   (6.4) %                       327    15.2 %                                                                         327      15.0 %



 Other (f)                                                                                                             -                                 (8)  (0.4) %                                                                         (8)    (0.4) %



 Non-GAAP other (expense) income, net (a)                                                                          $(25)   (1.2) %                     $(23)  (1.1) %                                $5                
    $   -            $(18)    (0.8) %




  
            Amounts in tables are rounded to the nearest millions. As a result, certain amounts may not recalculate.


  
          
            Percentages of revenue are calculated based on the revenue of the respective segment.





  The consolidated results for Q2 2024 and YTD 2024 include the results for GRAIL which was spun off on June 24, 2024.




   (a)                                                                                                                     Non-GAAP gross profit, included within non-GAAP operating profit (loss), is a key measure of the effectiveness and efficiency of manufacturing processes, product mix and
                                                                                                                            the average selling prices of our products and services. Non-GAAP operating profit (loss) and non-GAAP other income (expense), net exclude the effects of the pro forma
                                                                                                                            adjustments as detailed above. Non-GAAP operating margin is a key component of the financial metrics utilized by the company's board of directors to measure, in part,
                                                                                                                            management's performance and determine significant elements of management's compensation. Management has excluded the effects of these items in these measures to assist
                                                                                                                            investors in analyzing and assessing past and future operating performance.


   (b)                                                                                                                   
 Reconciling amounts are recorded in cost of revenue.


   (c)                                                                                                                     Amounts for Q2 2025 consist of $16 million for amortization of intangible assets (cost of revenue) and $9 million related primarily to legal and other expenses for the
                                                                                                                            pending SomaLogic acquisition and legal expenses for the GRAIL acquisition (SG&A), offset by $21 million for fair value adjustments on our contingent consideration
                                                                                                                            liabilities (SG&A). Amounts for YTD 2025 consist of $33 million for amortization of intangible assets (cost of revenue) and $15 million related primarily to legal expenses
                                                                                                                            for the GRAIL acquisition and legal and other expenses for the pending SomaLogic acquisition (SG&A), offset by $32 million for fair value adjustments on our contingent
                                                                                                                            consideration liabilities (SG&A). Consolidated amounts for Q2 2024 consist of $271 million for fair value adjustments on our contingent consideration liabilities, offset by
                                                                                                                            $47 million for amortization of intangible assets, $49 million related primarily to legal and other expenses for the acquisition and divestiture of GRAIL, and $7 million for
                                                                                                                            accrued interest on the EC fine. Consolidated amounts for YTD 2024 consist of $255 million for fair value adjustments on our contingent consideration liabilities, offset by
                                                                                                                            $97 million for amortization of intangible assets, $81 million related primarily to legal and other expenses for the acquisition and divestiture of GRAIL, and $14 million
                                                                                                                            for accrued interest on the EC fine.


   (d)                                                                                                                     Amounts for Q2 2025, YTD 2025 and Q2 2024 consist primarily of employee severance costs related to restructuring activities. Amounts for YTD 2024 consist primarily of lease
                                                                                                                            and other asset impairments.


   (e)                                                                                                                   
 Amounts consist primarily of mark-to-market adjustments and impairments on our strategic investments.


   (f)                                                                                                                     Consolidated amounts for Q2 2024 consist of $8 million for fair value adjustments on our Helix contingent value right, which was settled in 2024, offset by $2 million for
                                                                                                                            unrealized gains/losses related to foreign currency balance sheet remeasurement of the EC fine liability, that was reversed in 2024, and unrealized/realized mark-to-
                                                                                                                            market gains/losses on hedge associated with the EC fine, for which such forward contracts were terminated in 2024. Consolidated amounts for YTD 2024 consist of $11 million
                                                                                                                            for fair value adjustments on our Helix contingent value right, offset by $3 million for unrealized gains/losses related to foreign currency balance sheet remeasurement of
                                                                                                                            the EC fine liability and unrealized/realized mark-to-market gains/losses on hedge associated with the EC fine.


   (g)                                                                                                                   
 Amounts for YTD 2025 consist of $3 million for costs related to board membership changes and $2 million for legal contingency accrual.


   (h)                                                                                                                     Amounts for Q2 2025 and YTD 2025 consist of an intangible asset impairment related to Core Illumina. Amounts for Q2 2024 and YTD 2024 consist of goodwill and IPR&D intangible
                                                                                                                            asset impairments related to GRAIL. Amount for YTD 2024 also consists of an IPR&D intangible asset impairment related to Core Illumina.

                                                             
          
            Illumina, Inc.

                                              
          
            Results of Operations - Non-GAAP (continued)

                                                         
          
            (Dollars in millions)

                                                              
          
            (unaudited)





 
            TABLE 4: 
            RECONCILIATION OF GAAP AND NON-GAAP TAX PROVISION:




                                                                                                                     
       
          Three Months Ended


                                                                                                                                June 29, 2025                         June 30, 2024


                                                                                                                                Core/
                                                                                                                                 Consolidated                         Core Illumina Consolidated



 
            GAAP tax provision                                                                                   $71 23.4 %           $35    35.0 %         $12 (0.6) %



 Income tax provision (b)                                                                                          (1)                 (1)                  (1)



 GILTI, US foreign tax credits, global minimum top-up tax (c)                                                        -                (20)                 (99)



 Incremental non-GAAP tax expense (d)                                                                             (16)                  41                   104



 Non-GAAP tax provision (a)                                                                                        $54 22.2 %           $55    24.2 %         $16  22.3 %




                                                                                                                      
       
          Six Months Ended


                                                                                                                                June 29, 2025                         June 30, 2024


                                                                                                                                Core/
                                                                                                                                 Consolidated                         Core Illumina Consolidated



 
            GAAP tax provision                                                                                  $122 25.1 %           $80    37.3 %         $28 (1.4) %



 Income tax provision (b)                                                                                          (7)                 (1)                  (1)



 GILTI, US foreign tax credits, global minimum top-up tax (c)                                                        -                (33)                (116)



 Incremental non-GAAP tax expense (d)                                                                             (18)                  62                   117



 Non-GAAP tax provision (a)                                                                                        $97 22.1 %          $108    24.9 %         $28  28.8 %




 The consolidated results for Q2 2024 and YTD 2024 include the results for GRAIL which was spun off on June 24, 2024.




  (a)                                                                                                                    Non-GAAP tax provision excludes the effects of the pro forma adjustments detailed above, which have been excluded to assist investors in analyzing and assessing past and
                                                                                                                          future operating performance.


  (b)                                                                                                                  
 Amounts represent the difference between book and tax accounting related to stock-based compensation cost.


  (c)                                                                                                                    Amounts represent the impact of GRAIL pre-acquisition net operating losses on GILTI, the utilization of US foreign tax credits, and the Pillar Two global minimum top-up
                                                                                                                          tax, which no longer applies for 2025 since the GRAIL pre-acquisition net operating losses were fully utilized in prior years.


  (d)                                                                                                                  
 Incremental non-GAAP tax expense reflects tax impact of the non-GAAP adjustments listed in Table 2.

Investors:
Brian Blanchett
+1.858.291.6421
ir@illumina.com

Media:
Christine Douglass
pr@illumina.com

View original content:https://www.prnewswire.com/news-releases/illumina-reports-financial-results-for-second-quarter-of-fiscal-year-2025-302519051.html

SOURCE Illumina, Inc.